Plant Phenomics / 2020 / Article / Tab 4

Research Article

Soybean Root System Architecture Trait Study through Genotypic, Phenotypic, and Shape-Based Clusters

Table 4

Summary data for genotype-, phenotype-, and shape-based clusters. Summary in respect to country of origin, maturity group (MG), growth habit, diversity, root traits (TRL, PRL, WID, CVA, LRB, VOL, LRA, SOL2, LED, RHZO, TRL_GR, TRLUpper, and Root_weight) at 9 days after germination, iRoot category rankings, and phenotype-based cluster mean value. iRoot mean rank is calculated from the scores of all the genotypes within the specific GBC, PBC, or shape-based cluster. PBC mean was calculated by averaging the PBC groupings of genotypes that comprised the cluster.

Genotype-based clusterPhenotype-based clusterShape-based cluster

CountryABCDEFGHABCDEFGHABCDEFGH
 China34814374231191155427466812024242514141819
 Japan083127520139916332546435145
 Korea31710703010175710055454125
 Other162321200154412021222143
 Russia0160000010473200100703313
 USA2210000000068810031562510
299620414083820323985683121343535484228294035

MGABCDEFGHABCDEFGHABCDEFGH
 11120320010284410054232201
 27451222261741123228275641211181911101717
 320398163622114285823526701820152628151222
 4100000010101000000001100

Growth habitABCDEFGHABCDEFGHABCDEFGH
 Determinate129312341172112412304501671113108914
 Semideterminate274183033021671220120574619
 Indeterminate266013113734101105837416831722192828141917

DiversityABCDEFGHABCDEFGHABCDEFGH
 Diverse910000000034300002023210
 Elite1300000000034510001133041
 Landrace79520414083820323924875111343532344336262439

Root traitABCDEFGHABCDEFGHABCDEFGH
 TRL218229235222220148205229309274244219198175152119255232225234207223190197
 PRL37.336.537.234.435.933.835.136.237.937.236.836.735.134.432.530.736.236.536.036.136.135.635.935.2
 WID16.717.117.815.316.412.015.916.920.619.217.716.615.213.512.69.818.917.316.817.016.216.614.514.2
 CVA316319336272300207283312406368333308273240208155354321310313298302267254
 LRB72.473.675.475.273.359.567.572.678.978.775.573.970.266.059.450.774.174.072.375.771.170.568.971.8
 VOL16316818215416596.112916420918917116414613710787.7180167162166155149145143
 LRA87.187.087.586.687.085.986.587.087.587.287.287.186.686.486.186.487.287.486.786.886.886.986.986.7
 SOL2138133136116130133132130125127129134131131131126132132131127137129134123
 LED2.772.813.012.332.771.952.632.653.132.982.862.722.572.222.101.932.982.892.802.712.762.612.532.24
 RHZO375439144033375637122620356639265279465441773753338730042685207343613959384839963544381532443383
 TRL_GR14815716214914899.413615721318516615013411310482.9172159152160142150128131
 TRLUpper14915616514015087.113615222018916614813010991.572.0176159152156141147126123
 Root_weight0.1020.1000.0990.0910.1010.0470.0720.0850.1440.1110.1010.0970.0860.0730.0530.0450.1080.0990.0960.0980.0900.0930.0810.078
 PBC mean4.003.723.354.154.126.884.553.701.002.003.004.005.006.007.008.002.713.63.894.524.523.935.244.97

iRoot mean rankABCDEFGHABCDEFGHABCDEFGH
 Drought Tol.15813413515715023918213253085140217255282291116142146108182136191160
 N. Foraging1491199017115528218813222579515020321924724757108135116175146212228
 Umbrella117119772021522631891373208015121726528029180104136138155155180222
 Beard1841571896814313216214525609513720224427327517218216011817713815683
 Maximum1281168717015127721214314113014315915113813213371113138122171154197211
 iRoot rank mean147129116154150239187138395910014719822424324799130143120172146187181